math-optim/stats/stats.go
leo cffbcd9866
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go: improve plotting for GAs
* handle special cases
* extend title, description
* set custom x axis description
2023-01-21 02:45:56 +01:00

167 lines
4.0 KiB
Go

// Copyright 2023 wanderer <a_mirre at utb dot cz>
// SPDX-License-Identifier: GPL-3.0-or-later
package stats
import (
"encoding/json"
"io/ioutil"
"log"
"git.dotya.ml/wanderer/math-optim/util"
"gonum.org/v1/gonum/stat"
)
// BenchRound holds the iteration couter value and Results of size 'maxFES'.
type BenchRound struct {
Iteration int
Results []float64
}
type FuncStats struct {
BenchName string
BenchResults []BenchRound
// MeanVals holds the mean value for each step of the iteration.
MeanVals []float64
}
// BenchMean structure holds mean vals and metadata of a bench-params
// combination.
type BenchMean struct {
Bench string
Dimens int
Iterations int
Generations int
// Neighbours param is used in Hill Climbing type algos, set to -1 if not
// applicable.
Neighbours int
// MeanVals holds the mean value for each step of the iteration.
MeanVals []float64
}
// AlgoBenchMean holds BenchMean structs of different benchmarks but the same algorithm.
type AlgoBenchMean struct {
Algo string
BenchMeans []BenchMean
}
// MeanStats aggregates AlgoMean structs of different algos.
type MeanStats struct {
AlgoMeans []AlgoBenchMean
}
// AlgoMeanVals holds computed mean values of an Algo.
type AlgoMeanVals struct {
Title string
// MeanVals of a particular bench func to compare.
MeanVals []float64
}
type Stats struct {
Algo string
Dimens int
BenchFuncStats []FuncStats
Iterations int
// this should perhaps be named FES as that is a smarter thing to be
// comparing than algo generations, which can vary based on the type of
// algo, number of neighbours, etc..
Generations int
// NP is the initial population size, disable with 0. Only applicable to
// GAs (see algo/de for more details).
NP int
// F is the mutation factor, disable with 0. Only applicable to GAs.
F float64
// CR is the crossover probability, disable with 0. Only applicable to GAs.
CR float64
}
// Len implements the sort.Interface.
func (a AlgoBenchMean) Len() int {
return len(a.BenchMeans)
}
// Less implements the sort.Interface.
func (a AlgoBenchMean) Less(i, j int) bool {
return a.BenchMeans[i].Bench < a.BenchMeans[j].Bench
}
// Swap implements the sort.Interface.
func (a AlgoBenchMean) Swap(i, j int) {
a.BenchMeans[i], a.BenchMeans[j] = a.BenchMeans[j], a.BenchMeans[i]
}
// Len implements the sort.Interface.
func (m MeanStats) Len() int {
return len(m.AlgoMeans)
}
// Less implements the sort.Interface.
// note: this in fact sorts in reverse (fits with our use case atm).
func (m MeanStats) Less(i, j int) bool {
// return m.AlgoMeans[i].Algo < m.AlgoMeans[j].Algo
return m.AlgoMeans[i].Algo > m.AlgoMeans[j].Algo
}
// Swap implements the sort.Interface.
func (m MeanStats) Swap(i, j int) {
m.AlgoMeans[i], m.AlgoMeans[j] = m.AlgoMeans[j], m.AlgoMeans[i]
}
func GetFuncStats(funcName string, benchResults []BenchRound) FuncStats {
f := FuncStats{
BenchName: funcName,
BenchResults: benchResults,
}
return f
}
func GetStats(algo string, dimens int, benchFuncStats []FuncStats, iterations, generations int) Stats {
s := Stats{
Algo: algo,
Dimens: dimens,
BenchFuncStats: benchFuncStats,
Iterations: iterations,
Generations: generations,
}
return s
}
func SaveStats(stats []Stats, fName string) {
prefix := "out/stats/"
ext := ".json"
// create required folders, bail early in case of an error.
if err := util.CreatePath(prefix); err != nil {
log.Fatalln("went to create stats dir, there was an issue: ", err)
}
if j, err := json.MarshalIndent(stats, "", " "); err != nil {
log.Fatal(err)
} else {
log.Println("saving json stats to:", prefix+fName+ext)
if err = ioutil.WriteFile(prefix+fName+ext, j, 0o600); err != nil {
log.Println("error saving stats to file:", err)
}
}
}
func GetMeanVals(values []BenchRound, fes int) []float64 {
res := make([]float64, fes)
for i := 0; i < fes; i++ {
iterVals := make([]float64, len(values))
for j, v := range values {
iterVals[j] = v.Results[i]
}
res[i] = stat.Mean(iterVals, nil)
}
return res
}