* guix/store/database.scm (assert-integer): New procedure.
(update-or-insert): Use it to validate NAR-SIZE and TIME.
* tests/store-database.scm ("sqlite-register with incorrect size"): New
test.
* guix/store/database.scm (timestamp): New procedure.
(sqlite-register): Use it as the default for #:time.
(register-items): Likewise for #:registeration-time.
Fixes <https://bugs.gnu.org/44760>.
Previously, the 'register-path' call would re-traverse ITEM to compute
its nar hash, even though that hash is already known in the initial
store. This patch also avoids repeated opening/closing of the
database.
* guix/store/database.scm (call-with-database): Export.
* guix/scripts/system.scm (copy-item): Add 'db' parameter. Call
'sqlite-register' instead of 'register-path'.
(copy-closure): Remove redundant call to 'references*'. Call
'call-with-database' and pass the database to 'copy-item'.
It is now up to the caller to deduplicate store contents.
* guix/store/database.scm (register-items): Remove #:deduplicate?
parameter and call to 'deduplicate'.
(register-path): Call 'deduplicate' when #:deduplicate? is true.
* gnu/build/image.scm (register-closure): Adjust call accordingly.
* gnu/build/vm.scm (register-closure): Likewise.
* guix/nar.scm (finalize-store-file): Likewise.
* guix/scripts/pack.scm (store-database): Likewise.
The assumption now is that the caller took care of resetting timestamps
and permissions.
* guix/store/database.scm (register-items): Remove #:reset-timestamps?
parameter and the call to 'reset-timestamps'.
(register-path): Adjust accordingly and add call to 'reset-timestamps'.
* gnu/build/image.scm (register-closure): Remove #:reset-timestamps?
parameter to 'register-items'.
* gnu/build/vm.scm (register-closure): Likewise.
* guix/nar.scm (finalize-store-file): Adjust accordingly.
* guix/scripts/pack.scm (store-database)[build]: Likewise.
It was made transactional in a4678c6ba18d8dbd79d931f80426eebf61be7ebe, with
the reasoning to prevent broken intermediate states from being visible. I
think this means something like an entry being in ValidPaths, but the Refs not
being inserted.
Using a transaction for this makes sense, but I think using one single
transaction for the whole register-items call is unnecessary to avoid broken
states from being visible, and could block other writes to the store database
while register-items is running. Because the deduplication and resetting
timestamps happens within the transaction as well, even though these things
don't involve the database, writes to the database will still be blocked while
this is happening.
To reduce the potential for register-items to block other writers to the
database for extended periods, this commit moves the transaction to just wrap
the call to sqlite-register. This is the one place where writes occur, so that
should prevent the broken intermediate states issue above. The one difference
this will make is some of the registered items will be visible to other
connections while others may be still being added. I think this is OK, as it's
equivalent to just registering different items.
* guix/store/database.scm (register-items): Reduce transaction scope.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
It's necessary that store items be locked and protected from garbage
collection while they are being registered. This documents that.
* guix/store/database.scm (register-path, register-items): document GC
protection and locking requirements.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
This fixes <https://bugs.gnu.org/42151>.
* gnu/system/images/hurd.scm (hurd-initialize-root-partition): Use #:wal-mode #f
in call to ...
* gnu/build/image.scm (initialize-root-partition): ... this, add #:wal-mode?
parameter, pass it to ...
(register-closure): ... this, add #:wal-mode? parameter, pass it to ...
* guix/store/database.scm (with-database): ... this, add #:wal-mode?
parameter, pass it to ...
(call-with-database): ... this, add #:wal-mode? parameter; when
set to #f, do not set journal_model=WAL.
Previously call-with-transaction would both retry when SQLITE_BUSY errors were
thrown and do what its name suggested (start and rollback/commit a
transaction). This changes it to do only what its name implies, which
simplifies its implementation. Retrying is provided by the new
call-with-SQLITE_BUSY-retrying procedure.
* guix/store/database.scm (call-with-transaction): no longer restarts, new
#:restartable? argument controls whether "begin" or "begin immediate" is
used.
(call-with-SQLITE_BUSY-retrying, call-with-retrying-transaction,
call-with-retrying-savepoint): new procedures.
(register-items): use call-with-retrying-transaction to preserve old
behavior.
* .dir-locals.el (call-with-retrying-transaction,
call-with-retrying-savepoint): add indentation information.
update-or-insert can break if an insert occurs between when it decides whether
to update or insert and when it actually performs that operation. Putting the
check and the update/insert operation in the same transaction ensures that the
update/insert will only succeed if no other write has occurred in the middle.
* guix/store/database.scm (call-with-savepoint): new procedure.
(update-or-insert): use call-with-savepoint to ensure the read and the
insert/update occur within the same transaction.
Most of our queries would fail to finalize their statements properly if sqlite
returned an error during their execution. This resolves that, and also makes
them somewhat more concise as a side-effect.
This also makes some small changes to improve certain queries where behavior
was strange or overly verbose.
* guix/store/database.scm (call-with-statement): new procedure.
(with-statement): new macro.
(last-insert-row-id, path-id, update-or-insert, add-references): rewrite to
use with-statement.
(update-or-insert): factor last-insert-row-id out of the end of both
branches.
(add-references): remove pointless last-insert-row-id call.
* .dir-locals.el (with-statement): add indenting information.
guile-sqlite3 provides statement caching, making it unnecessary for sqlite to
keep re-preparing statements that are frequently used. Unfortunately it
doesn't quite emulate the semantics of sqlite_finalize properly, because it
doesn't cause a commit if the statement being finalized is the last "active"
statement (see https://notabug.org/guile-sqlite3/guile-sqlite3/issues/12). We
work around this by wrapping sqlite-finalize with our own version that ensures
sqlite-reset is called, which does The Right Thing™.
* guix/store/database.scm (sqlite-finalize): new procedure that shadows the
sqlite-finalize from (sqlite3).
* guix/store/database.scm (SQLITE_BUSY, register-output-sql): New variables.
(add-references): Don't try finalizing after each use, only after all the
uses (otherwise a finalized statement would be used if #:cache? was #f).
(call-with-transaction): New procedure.
(register-items): Use call-with-transaction to prevent broken intermediate
states from being visible.
* .dir-locals.el (call-with-transaction): indent it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
This should avoid "database is locked" errors when there's a lot of
concurrency, for instance when offloading simultaneously a lot of
builds.
* guix/store/database.scm (call-with-database): Add two 'sqlite-exec'
calls to set 'journal_mode' and 'busy_timeout'.
* guix/store/database.scm (%default-database-file): New variable.
(path-id): Export.
* guix/nar.scm (finalize-store-file): Use 'with-database' instead of
'with-store', and use 'path-id' instead of 'valid-path?'.
Fixes <https://bugs.gnu.org/32600>.
Reported by Leo Famulari.
* guix/store/database.scm (register-items): Check whether TO-REGISTER is
in DB by calling 'path-id', and skip the reset-timestamps,
registration, and deduplication phases when it is.
* guix/store/database.scm (register-items): Add #:log-port. Use
'progress-reporter/bar' to show a progress report.
(register-path): Pass #:log-port to 'register-items'.
Previously, store items registered in the database by this code (for
instance, store items retrieved by 'guix offload' and passed to
'restore-file-set') would have an mtime of 0 instead of 1.
This would cause problems for things like .go files: Guile would
consider them to be older than the corresponding .scm file, and
consequently it would ignore them and possibly use another (incorrect)
.go file.
Reported by Ricardo Wurmus.
* guix/store/database.scm (reset-timestamps): Pass 1, not 0, to
'utime'.
* tests/store-database.scm ("register-path"): Check the mtime of FILE
and REF.
* guix/build/store-copy.scm (store-info): Export.
* guix/store/database.scm (register-items): New procedure.
(register-path): Implement in terms of 'register-items'.
* gnu/build/install.scm (register-closure): Use 'register-items' instead
of 'for-each' and 'register-path'.
* guix/store/database.scm (sqlite-register): Add #:schema. Parameterize
'sql-schema' based on this.
(register-path): Add #:schema and pass it to 'sqlite-register'.
* guix/store/database.scm (add-reference-sql): Remove nested SELECT.
(add-references): Expect REFERENCES to be a list of ids.
(sqlite-register): Call 'path-id' for each of REFERENCES and pass it to
'add-references'.
* tests/store-database.scm ("register-path with unregistered references"):
New test.
