gnu: Add r-gchain.

* gnu/packages/bioinformatics.scm (r-gchain): New variable.
This commit is contained in:
Ricardo Wurmus 2022-09-21 10:54:56 +02:00
parent 6ad4d74aca
commit af663c9e48
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@ -7375,6 +7375,40 @@ BAM files.")
file formats, and ffTrack objects in multi-track panels.")
(license license:gpl2))))
(define-public r-gchain
(let ((commit "dc393e8dd0d8efaf36270c04d7112db8553db36a")
(revision "1"))
(package
(name "r-gchain")
(version (git-version "0.2.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mskilab/gChain/")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"105wgi5w2fhwq1grsvj6zjigwg0sny3z7zr577q8ki3qffjwdkj0"))))
(properties `((upstream-name . "gChain")))
(build-system r-build-system)
(propagated-inputs
(list r-bamutils
r-biostrings
r-data-table
r-genomicalignments
r-genomicranges
r-gtrack
r-gutils
r-matrix
r-rtracklayer))
(home-page "https://github.com/mskilab/gChain/")
(synopsis "Additional capabilities and speed for GenomicRanges operations")
(description
"This R package provides additional capabilities and speed for
GenomicRanges operations.")
(license license:gpl2))))
(define-public r-presto
(let ((commit "052085db9c88aa70a28d11cc58ebc807999bf0ad")
(revision "0"))